CDS
| Accession Number | TCMCG007C13531 |
| gbkey | CDS |
| Protein Id | XP_009128198.2 |
| Location | complement(join(13902664..13902729,13902822..13902938,13903025..13903144,13903219..13903776,13903891..13903950,13904042..13904107,13904215..13904325,13904412..13904502,13904595..13904695,13904768..13904875,13904964..13905526,13905611..13907471)) |
| Gene | LOC103853047 |
| GeneID | 103853047 |
| Organism | Brassica rapa |
Protein
| Length | 1273aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA249065 |
| db_source | XM_009129950.3 |
| Definition | eukaryotic translation initiation factor 5B [Brassica rapa] |
EGGNOG-MAPPER Annotation
| COG_category | J |
| Description | Contains the following InterPro domains Small GTP-binding protein (InterPro IPR005225), Translation elongation factor EFTu EF1A, domain 2 (InterPro IPR004161), Translation initiation factor 2 related (InterPro IPR015760), Protein synthesis factor, GTP-binding (InterPro IPR000795) |
| KEGG_TC | - |
| KEGG_Module |
M00161
[VIEW IN KEGG] |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko00194 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03012 [VIEW IN KEGG] |
| KEGG_ko |
ko:K02703
[VIEW IN KEGG] ko:K03243 [VIEW IN KEGG] |
| EC |
1.10.3.9
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00195
[VIEW IN KEGG] ko01100 [VIEW IN KEGG] ko03013 [VIEW IN KEGG] map00195 [VIEW IN KEGG] map01100 [VIEW IN KEGG] map03013 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGGGCGGAAGAAGCCGAGTGCTCGTGGTGGAGACGATGAACCCACTGCTTCATCTCTCGTTGGTGGCGCTAAATCCAAGAAGAAGTCCGTTCAAATCGACGACGATGAGTACTCCGTAGGAACGGAGCTCTCTGAGGATCCGCCTAAAGGTGAGGAAGACAAGGTTGTAATCACTGGGAAGAAGAAGAGTAAGAAAGGGAATAAGAAAGGTGCGCTTCAGGATGATGAGGAAGACGATGTTGTCCCGGAGATTGCTTTTGAAGGGAAGAAGAAGAAGTCTAAGTCTAAGAAAGGTGGTGGCTCTGTTAGCTTTGCTTTGCTAGATGATGATGAAGGTGATAAGGATGATGAAGATGATAAAGTGGAGGATGAGCCTGTCATGAGTAACAAGGGTAAGAAAGGTGGTAATTCGTTTGCGGCTTCAGCTTTCGATGCACTTGGTGGTGATGATGAAGATGACGAGGAAGCGGAAAAAGATGAGGAGGAGGTGTCTCCCATCACCTTCTCTGGTAAGAAGAAGTCTTCTAAATCGTCCAAGAAGAGTGCTAATTCATTTGCGGCTGCTTTACTTGATGATGATGATGATGAAGAGGAGACTAATGCCGTTGAGGAGGAAGAGAGTCCTGAGATCATGTTTACTGGTAAGAAGAAGTCGTCTAAGAAGAAGGGCAGTAGTGTTTTGGCCTCGTTAGGTGATGATGACTCGATGCTAGGAAGTGAAGTTGCTGAGGAAATAAGTAAGGATAAAGCTTCGGATACTAAGAGTGCAGAGGTTGTAGAACCTGCGAAGAGTAAGAAAAAGAAGAAGAATAATAAGAGTGGAAGGACAGTACAGGAAGAAGATGATTTGGACAAACTTCTTGCAGAACTTGGAGAAGGCCCAGCTTCTGGAAAACCTGCTTCATCCCAGCCCGAAGAAGATAAATTTCAAGCTCAGGCTCAGCCAGTTGCACCTGTAGAGAATGCTGGTGAGAAGGAAGAAGAAGAAGAGAGTGCTGCAGCGAAGAAAAGGAGAAAGAAGAAGGAGAAAGAGAAGGAAAAGAAAGCAGCAGCTGCAACCTCTTCTGTGGAGGCTAAGGAGGACAAGCAAGAAGAATCAGTAGCTGAGCCACTGCAGGGGAAGAAGAAGGATGCAAAGGGTAAAGCAGCTGAGAAGAAACTTCCGAAACATGTTAGAGAGATGCAAGAGGCTCTTGCACGAAGGCAAGAAGCTGAAGAGAGAAAGAAGAAGGAAGAGGAGGAGAAATTGAGAAAGGAGGAAGAGGAGCGTCTTAGGCAGGAAGAGCTTGAGAGGCAAGCTGAGGAGGCTAAGCGCAAGAAGAAGGAAAAGGAAAAGGAGAAACTTTTGAGGAAGAAGCTAGAGGGCAAGCTTCTAACAGCAAAGCAAAAGAGTGAAGCTCTTAAGAGGGAGGCTTTTAAGAACCAGTTGCTTGCTAATGGTGGAGGTCTCCCACTTGCAGATGAGGGCGAGCCTGCCACAAAGCGTCCCGTTTATGCCAACAAGAAAAAGTCAGCTCGCCAAAAGGGCAATGACTCTGCCTCTGTTCAGGTGGAAGAGGAGGTAGACCCAAAAGAGAGTCATGCAGATGAGCCAGATACTTTAGGTGAAGTGGGTTCAGCAGAAACTGAAAAGGTTGATTTAGTAGAGTCAGCAGACACTGATGAGAAATCAGGTACTGCTGATGTAGCTGCAGAGAATGGGGCTGAGGAAGATGAGGAAGAAGATGAATGGGATGCAAAAAGCTGGGGGGATGATGTTGATCTTAAGTTCAAAGGTGATTTCGATGATGAAGAGGACAAAGCTCAGCCTGTAGTGAAGAAAGATATGAATGACGCTGTCTCAAAGACGCAAGATTCAGGCCCTGAAACGGTAAAACCAACTGCTAAACCAGCAGGTACGGAAAACCCAACAGCACCTGCCACTAAAACTTTACCTGGAGTGGAAGATGCTGCACGTGGAAAACGTGCTACCCGGGCAAAAGATGCCTCTAAGAAAGGCAAAGGCTTAGCTTCCAGTGAACCCAAAGAGGGTGAAGAAAATCTCCGCTCTCCCATTTGCTGCATCATGGGCCATGTCGATACTGGTAAAACAAAGCTGTTGGATTGCATCAGAGGAACAAATGTACAGGAAGGCGAGGCTGGAGGTATAACTCAGCAGATTGGCGCAACATATTTCCCTGCGGAAAACATCCGAGAGAGAACCAGGGAACTGAAAGCCGATGCAAAACTTAAGGTGCCAGGTCTATTGGTTATTGATACACCTGGTCACGAGTCCTTCACGAATCTGCGGTCAAGGGGTTCAAGTTTGTGCGACCTTGCAATTTTGGTGGTTGACATAATGCATGGGTTGGAGCCACAAACCATAGAATCTCTAAATCTATTGAGAATGAGGGACACAGAGTTCATTGTTGCTTTGAATAAGGTGGATAGGCTATATGGATGGAAAACATGCAAGAATGCTCCTATCGTAAAGGCAATGAAGCAGCAAACTAAAGATGTTGTAAATGAATTTAACATGAGGCTCACTGGGATTATAACTCAGTTCAAGGAGCAAGGTCTCAACACTGAGCTTTACTACAAGAATAAAGAAATGGGAGAAACTTTCAGTATTGTTCCTACCAGTGCTATTACTGGGGAAGGGATCCCAGATCTTTTGCTGTTGTTGGTTAATTGGGCTCAGAAAACAATGGTTGAGAAGCTTACATATGTTGATGACGTGCAGTGTACTGTCCTGGAGGTCAAAGTTATAGAAGGCCATGGAACAACGATTGATGTTGTGTTGGTAAACGGTGTACTTCACGAAGGTGATCAAATCGTCGTGTGTGGGTTACAGGGACCTATAGTCACAACGATTAGAGCGTTACTGACTCCTCATCCAATGAAGGAGCTACGGGTGAAGGGTACTTATGTGCATCATAAAGAAATAAAGGCTGCACAGGGTATAAAAATTACAGCGCAGGGTCTTGAACACGCTATTGCTGGCACTGCTCTGCACGTGATTGGACCTGATGATGACATCGAAGCAATCAAGGAGCAGGCAATGGAAGACATGGAGTCAGTTCTGAGCAGGATTGACAAAAGCGGCGAAGGAGTTTATGTACAAGCGTCTACACTAGGGTCACTTGAAGCGTTGCTTGAATTCTTGAAGTCCCCAGCTGTGAAGATACCTGTAAGTGGCATCGGTATAGGGCCTGTGCATAAGAAGGATATCATGAAGGCGGGAGTGATGCTCGAGAGGAAGAAGGAATACGCTACGATTTTGGCTTTTGACGTGAAAGTGACAACAGACGCTCGTGAGCTCGCAGACGAAATGGGAGTTAAGATCTTCTGCGCTGATATCATCTACCATTTGTTCGATCAGTTTAAGGCGTATATTGAGAGTATCAAAGAGGAGAAGAAGAAGGAATCAGCCGATGAAGCAGTCTTCCCATGTGTCCTTCGGATTTTACCTAACTGTGTGTTCAATAAGAGAGACCCAATAGTCCTTGGAGTTGATGTCGTTGAGGGTATACTTAAGATTGGAACTCCTATCTGCGTCCCTAGTAGAGAGTTTATCGATATTGGCCGCATTGCCTCTATTGAGAACAATCACAAGCCCGTTGACTATGCGAAGAAGGGCAGCCAGGTGGCTATCAAGATTATTGCTTCAAACCCTGAAGAGCAGAAGATGTTTGGGAGGCATTTTGACATGGAAGATGAGCTTGTGAGTCACATTTCGAGGAGATCTATCGACATTCTCAAAACTAACTACAGGGATGAGTTATCCATGGAAGAGTGGAAGCTAGTTGTAAAACTGAAGAACATCTTCAAGATACAGTAG |
| Protein: MGRKKPSARGGDDEPTASSLVGGAKSKKKSVQIDDDEYSVGTELSEDPPKGEEDKVVITGKKKSKKGNKKGALQDDEEDDVVPEIAFEGKKKKSKSKKGGGSVSFALLDDDEGDKDDEDDKVEDEPVMSNKGKKGGNSFAASAFDALGGDDEDDEEAEKDEEEVSPITFSGKKKSSKSSKKSANSFAAALLDDDDDEEETNAVEEEESPEIMFTGKKKSSKKKGSSVLASLGDDDSMLGSEVAEEISKDKASDTKSAEVVEPAKSKKKKKNNKSGRTVQEEDDLDKLLAELGEGPASGKPASSQPEEDKFQAQAQPVAPVENAGEKEEEEESAAAKKRRKKKEKEKEKKAAAATSSVEAKEDKQEESVAEPLQGKKKDAKGKAAEKKLPKHVREMQEALARRQEAEERKKKEEEEKLRKEEEERLRQEELERQAEEAKRKKKEKEKEKLLRKKLEGKLLTAKQKSEALKREAFKNQLLANGGGLPLADEGEPATKRPVYANKKKSARQKGNDSASVQVEEEVDPKESHADEPDTLGEVGSAETEKVDLVESADTDEKSGTADVAAENGAEEDEEEDEWDAKSWGDDVDLKFKGDFDDEEDKAQPVVKKDMNDAVSKTQDSGPETVKPTAKPAGTENPTAPATKTLPGVEDAARGKRATRAKDASKKGKGLASSEPKEGEENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTRELKADAKLKVPGLLVIDTPGHESFTNLRSRGSSLCDLAILVVDIMHGLEPQTIESLNLLRMRDTEFIVALNKVDRLYGWKTCKNAPIVKAMKQQTKDVVNEFNMRLTGIITQFKEQGLNTELYYKNKEMGETFSIVPTSAITGEGIPDLLLLLVNWAQKTMVEKLTYVDDVQCTVLEVKVIEGHGTTIDVVLVNGVLHEGDQIVVCGLQGPIVTTIRALLTPHPMKELRVKGTYVHHKEIKAAQGIKITAQGLEHAIAGTALHVIGPDDDIEAIKEQAMEDMESVLSRIDKSGEGVYVQASTLGSLEALLEFLKSPAVKIPVSGIGIGPVHKKDIMKAGVMLERKKEYATILAFDVKVTTDARELADEMGVKIFCADIIYHLFDQFKAYIESIKEEKKKESADEAVFPCVLRILPNCVFNKRDPIVLGVDVVEGILKIGTPICVPSREFIDIGRIASIENNHKPVDYAKKGSQVAIKIIASNPEEQKMFGRHFDMEDELVSHISRRSIDILKTNYRDELSMEEWKLVVKLKNIFKIQ |